This is an very good question... One Ive thought about but have not asked.
I always rotate my tires at 5kmiles...with oil changes. I havent decided yet how i will handle the MM's, but i will not be waiting until the 8k mile time to rotate tires...or will I be letting the dealership rotate my tires.
I have had multiple set of wheels from both Honda and Ford dealerships damage and have to replace both wheels, and cross-threaded lug nuts. So for the past 10 years or so, i just do it myself. It gives me a chance to inspect brake pads, etc while the wheels are off and the trucks is lifted.
(in the past year I know of 2 people that have had factory wheels replaced by Ford and 1 by Toyota...damage from wheel balancing machines, or impact wrenches...just sloppy shop work)
So my current pan is to just document in my log book, when services were performed. An item like this i will not depend on the MM's to remind me...i guess after all these years, i have my own system. I do plan on taking the truck in for "some" maintenance, just to be in my local dealerships system, check for any updates, etc. But i will end up with a mix of some stuff i do...and some stuff I "let them do". HaHa
Just document EVERYTHING!